BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005B10LP1|AL425337
(392 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1584 126 2e-29
>3x_Contig1584
Length = 9710
Score = 126 bits (61), Expect = 2e-29
Identities = 131/161 (81%)
Strand = Plus / Minus
Query: 219 tgacagaatcgcatataaaaaaaatatmagrgcwgaagaaraaaaattatattgagtggg 278
|||| ||||||||||| | |||||| || || ||||| | |||||||||||||||||
Sbjct: 7942 tgactgaatcgcatattgtataaatataagggctgaagaggataaattatattgagtggg 7883
Query: 279 gaaaaaccgtataawmaaacaccgatgttatttagtgaawataaamtttwacttgacaag 338
|||||||||||| || ||||| |||||||||||| ||| ||| ||||| || |
Sbjct: 7882 gaaaaaccgtattttcaatcaccgttgttatttagtgtttgtaatcttttacttgtcatg 7823
Query: 339 waatcaacaaagcaacatcaaatacaaaacgacgaaactaa 379
|||| ||||||||||||||||||||| ||||||||||||
Sbjct: 7822 tgatcagcaaagcaacatcaaatacaaaccgacgaaactaa 7782
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.44 0.720 1.36
Gapped
Lambda K H
1.44 0.720 1.36
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3264
Number of Sequences: 1807
Number of extensions: 3264
Number of successful extensions: 90
Number of sequences better than 1.0e-20: 1
length of query: 392
length of database: 10,358,551
effective HSP length: 15
effective length of query: 377
effective length of database: 10,331,446
effective search space: 3894955142
effective search space used: 3894955142
T: 0
A: 40
X1: 5 (10.4 bits)
X2: 14 (29.0 bits)
S1: 11 (23.3 bits)
S2: 48 (100.0 bits)